Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp3Q7TNH6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp3Q7TNH6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.57■□□□□ 0.72
Nphp3Q7TNH6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp3Q7TNH6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Gm13884-201ENSMUST00000118103 829 ntBASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Gm25406-201ENSMUST00000157599 105 ntBASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Gm25745-201ENSMUST00000174945 133 ntBASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp3Q7TNH6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp3Q7TNH6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp3Q7TNH6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Mir8098-201ENSMUST00000184011 137 ntBASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nphp3Q7TNH6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Nphp3Q7TNH6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Nphp3Q7TNH6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.51■□□□□ 0.71
Nphp3Q7TNH6 Gm7506-201ENSMUST00000207758 815 ntBASIC19.51■□□□□ 0.71
Nphp3Q7TNH6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nphp3Q7TNH6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms