Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.74□□□□□ -0.53
Ndufa4Q62425 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ndufa4Q62425 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ndufa4Q62425 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.73□□□□□ -0.53
Ndufa4Q62425 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.73□□□□□ -0.53
Ndufa4Q62425 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndufa4Q62425 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.72□□□□□ -0.53
Ndufa4Q62425 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Gm42569-201ENSMUST00000200539 472 ntBASIC11.72□□□□□ -0.53
Ndufa4Q62425 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.72□□□□□ -0.53
Ndufa4Q62425 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndufa4Q62425 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 App-207ENSMUST00000227737 2827 ntBASIC11.71□□□□□ -0.53
Ndufa4Q62425 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.71□□□□□ -0.53
Ndufa4Q62425 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Gm26571-201ENSMUST00000181399 666 ntBASIC11.71□□□□□ -0.53
Ndufa4Q62425 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndufa4Q62425 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndufa4Q62425 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ndufa4Q62425 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ndufa4Q62425 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Ndufa4Q62425 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndufa4Q62425 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms