Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.63□□□□□ -0.23
Scarb1Q61009 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Gm9731-201ENSMUST00000209480 747 ntBASIC13.63□□□□□ -0.23
Scarb1Q61009 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Scarb1Q61009 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scarb1Q61009 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.62□□□□□ -0.23
Scarb1Q61009 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scarb1Q61009 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.62□□□□□ -0.23
Scarb1Q61009 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scarb1Q61009 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Scarb1Q61009 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scarb1Q61009 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms