Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rc3h1Q4VGL6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.58■□□□□ 0.57
Rc3h1Q4VGL6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rc3h1Q4VGL6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rc3h1Q4VGL6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.58■□□□□ 0.57
Rc3h1Q4VGL6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rc3h1Q4VGL6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Gm6443-201ENSMUST00000203599 874 ntBASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rc3h1Q4VGL6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Gm8655-201ENSMUST00000221159 852 ntBASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rc3h1Q4VGL6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Gm12350-201ENSMUST00000121208 462 ntBASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rc3h1Q4VGL6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Gm27525-201ENSMUST00000184465 107 ntBASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rc3h1Q4VGL6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms