Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc27Q3V036 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc27Q3V036 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ccdc27Q3V036 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.57■□□□□ 0.88
Ccdc27Q3V036 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc27Q3V036 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Asic1-205ENSMUST00000228185 1818 ntBASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Prob1-201ENSMUST00000097619 3021 ntBASIC20.56■□□□□ 0.88
Ccdc27Q3V036 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Gm37055-201ENSMUST00000191866 133 ntBASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Gm30025-201ENSMUST00000218555 728 ntBASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc27Q3V036 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc27Q3V036 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Mir6982-201ENSMUST00000184354 68 ntBASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc27Q3V036 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms