Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Brf2Q3UAW9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brf2Q3UAW9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brf2Q3UAW9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brf2Q3UAW9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Brf2Q3UAW9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Brf2Q3UAW9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Brf2Q3UAW9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Brf2Q3UAW9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Brf2Q3UAW9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Gm10231-201ENSMUST00000181584 441 ntBASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Gm10175-202ENSMUST00000208752 441 ntBASIC15.2■□□□□ 0.02
Brf2Q3UAW9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brf2Q3UAW9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Brf2Q3UAW9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Gm9013-201ENSMUST00000132939 882 ntBASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Brf2Q3UAW9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms