Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1aP97445 Grk6-207ENSMUST00000225925 2769 ntBASIC14.85□□□□□ -0.03
Cacna1aP97445 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1aP97445 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1aP97445 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1aP97445 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Gm15653-201ENSMUST00000119247 907 ntBASIC14.84□□□□□ -0.03
Cacna1aP97445 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.84□□□□□ -0.03
Cacna1aP97445 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cacna1aP97445 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.84□□□□□ -0.03
Cacna1aP97445 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1aP97445 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1aP97445 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.83□□□□□ -0.03
Cacna1aP97445 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.83□□□□□ -0.03
Cacna1aP97445 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.83□□□□□ -0.03
Cacna1aP97445 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1aP97445 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1aP97445 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.83□□□□□ -0.03
Cacna1aP97445 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1aP97445 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cacna1aP97445 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Gm13616-201ENSMUST00000120600 222 ntBASIC14.83□□□□□ -0.04
Cacna1aP97445 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.83□□□□□ -0.04
Cacna1aP97445 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.83□□□□□ -0.04
Cacna1aP97445 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1aP97445 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.83□□□□□ -0.04
Cacna1aP97445 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.83□□□□□ -0.04
Cacna1aP97445 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cacna1aP97445 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Cacna1aP97445 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.82□□□□□ -0.04
Cacna1aP97445 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1aP97445 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Mir8117-201ENSMUST00000184773 107 ntBASIC14.82□□□□□ -0.04
Cacna1aP97445 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1aP97445 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.81□□□□□ -0.04
Cacna1aP97445 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1aP97445 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Gm8655-201ENSMUST00000221159 852 ntBASIC14.81□□□□□ -0.04
Cacna1aP97445 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.81□□□□□ -0.04
Cacna1aP97445 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.81□□□□□ -0.04
Cacna1aP97445 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.81□□□□□ -0.04
Cacna1aP97445 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1aP97445 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms