Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Rab4aP56371 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.78□□□□□ -0.36
Rab4aP56371 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.78□□□□□ -0.36
Rab4aP56371 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rab4aP56371 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Rab4aP56371 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.78□□□□□ -0.36
Rab4aP56371 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab4aP56371 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.78□□□□□ -0.36
Rab4aP56371 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rab4aP56371 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Rab4aP56371 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rab4aP56371 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab4aP56371 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab4aP56371 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab4aP56371 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab4aP56371 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rab4aP56371 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab4aP56371 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.77□□□□□ -0.36
Rab4aP56371 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.77□□□□□ -0.37
Rab4aP56371 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rab4aP56371 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rab4aP56371 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rab4aP56371 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rab4aP56371 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rab4aP56371 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rab4aP56371 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab4aP56371 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rab4aP56371 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rab4aP56371 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rab4aP56371 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rab4aP56371 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.76□□□□□ -0.37
Rab4aP56371 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms