Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm11779-201ENSMUST00000118541 368 ntBASIC13.39□□□□□ -0.27
Abca1P41233 Gm7862-201ENSMUST00000121461 292 ntBASIC13.39□□□□□ -0.27
Abca1P41233 Gm6736-201ENSMUST00000166583 948 ntBASIC13.39□□□□□ -0.27
Abca1P41233 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.39□□□□□ -0.27
Abca1P41233 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.38□□□□□ -0.27
Abca1P41233 Gm8000-201ENSMUST00000188378 592 ntBASIC13.38□□□□□ -0.27
Abca1P41233 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.38□□□□□ -0.27
Abca1P41233 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Abca1P41233 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Abca1P41233 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Abca1P41233 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.38□□□□□ -0.27
Abca1P41233 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Abca1P41233 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Gm13036-201ENSMUST00000117799 748 ntBASIC13.38□□□□□ -0.27
Abca1P41233 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.38□□□□□ -0.27
Abca1P41233 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.38□□□□□ -0.27
Abca1P41233 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Abca1P41233 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abca1P41233 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Abca1P41233 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Gm13312-201ENSMUST00000119631 718 ntBASIC13.37□□□□□ -0.27
Abca1P41233 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.37□□□□□ -0.27
Abca1P41233 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.37□□□□□ -0.27
Abca1P41233 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.37□□□□□ -0.27
Abca1P41233 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.37□□□□□ -0.27
Abca1P41233 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.37□□□□□ -0.27
Abca1P41233 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.37□□□□□ -0.27
Abca1P41233 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Abca1P41233 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Abca1P41233 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.37□□□□□ -0.27
Abca1P41233 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abca1P41233 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Abca1P41233 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Abca1P41233 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.36□□□□□ -0.27
Abca1P41233 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Abca1P41233 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Abca1P41233 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.36□□□□□ -0.27
Abca1P41233 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.36□□□□□ -0.27
Abca1P41233 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.36□□□□□ -0.27
Abca1P41233 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Abca1P41233 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms