Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.7■□□□□ 0.58
Pde6aP27664 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.7■□□□□ 0.58
Pde6aP27664 Gm15372-201ENSMUST00000120729 834 ntBASIC18.7■□□□□ 0.58
Pde6aP27664 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.7■□□□□ 0.58
Pde6aP27664 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.7■□□□□ 0.58
Pde6aP27664 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.7■□□□□ 0.58
Pde6aP27664 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.7■□□□□ 0.58
Pde6aP27664 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Pde6aP27664 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pde6aP27664 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pde6aP27664 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6aP27664 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6aP27664 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6aP27664 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Pde6aP27664 Gm27867-201ENSMUST00000184778 125 ntBASIC18.69■□□□□ 0.58
Pde6aP27664 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.69■□□□□ 0.58
Pde6aP27664 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.69■□□□□ 0.58
Pde6aP27664 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pde6aP27664 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6aP27664 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Pde6aP27664 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6aP27664 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pde6aP27664 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6aP27664 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.69■□□□□ 0.58
Pde6aP27664 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Pde6aP27664 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pde6aP27664 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.68■□□□□ 0.58
Pde6aP27664 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pde6aP27664 Gm15165-201ENSMUST00000118140 502 ntBASIC18.68■□□□□ 0.58
Pde6aP27664 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.68■□□□□ 0.58
Pde6aP27664 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.68■□□□□ 0.58
Pde6aP27664 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.68■□□□□ 0.58
Pde6aP27664 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.68■□□□□ 0.58
Pde6aP27664 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pde6aP27664 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6aP27664 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.67■□□□□ 0.58
Pde6aP27664 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pde6aP27664 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pde6aP27664 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pde6aP27664 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pde6aP27664 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pde6aP27664 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Pde6aP27664 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.66■□□□□ 0.58
Pde6aP27664 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.66■□□□□ 0.58
Pde6aP27664 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Pde6aP27664 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.66■□□□□ 0.58
Pde6aP27664 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pde6aP27664 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.65■□□□□ 0.58
Pde6aP27664 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pde6aP27664 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Pde6aP27664 Gm25406-201ENSMUST00000157599 105 ntBASIC18.65■□□□□ 0.58
Pde6aP27664 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms