Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TcraP01849 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TcraP01849 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Mir2861-201ENSMUST00000175539 82 ntBASIC11.82□□□□□ -0.52
TcraP01849 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.82□□□□□ -0.52
TcraP01849 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.82□□□□□ -0.52
TcraP01849 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TcraP01849 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TcraP01849 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
TcraP01849 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TcraP01849 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.81□□□□□ -0.52
TcraP01849 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.81□□□□□ -0.52
TcraP01849 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Gm2559-201ENSMUST00000201323 363 ntBASIC11.81□□□□□ -0.52
TcraP01849 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Gm4968-201ENSMUST00000071458 858 ntBASIC11.81□□□□□ -0.52
TcraP01849 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.81□□□□□ -0.52
TcraP01849 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TcraP01849 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TcraP01849 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TcraP01849 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TcraP01849 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.8□□□□□ -0.52
TcraP01849 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.8□□□□□ -0.52
TcraP01849 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.8□□□□□ -0.52
TcraP01849 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.8□□□□□ -0.52
TcraP01849 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.8□□□□□ -0.52
TcraP01849 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.8□□□□□ -0.52
TcraP01849 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TcraP01849 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms