Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.55■□□□□ 0.24
Syn1O88935 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.55■□□□□ 0.24
Syn1O88935 Gm5312-201ENSMUST00000203728 547 ntBASIC16.55■□□□□ 0.24
Syn1O88935 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.55■□□□□ 0.24
Syn1O88935 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.54■□□□□ 0.24
Syn1O88935 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Syn1O88935 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Gm11764-201ENSMUST00000120221 623 ntBASIC16.54■□□□□ 0.24
Syn1O88935 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Gm5682-201ENSMUST00000173402 505 ntBASIC16.54■□□□□ 0.24
Syn1O88935 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Syn1O88935 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.54■□□□□ 0.24
Syn1O88935 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Syn1O88935 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syn1O88935 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.53■□□□□ 0.24
Syn1O88935 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Syn1O88935 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Syn1O88935 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.53■□□□□ 0.24
Syn1O88935 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 Gm27300-201ENSMUST00000184085 97 ntBASIC16.53■□□□□ 0.24
Syn1O88935 Gm27335-201ENSMUST00000184758 97 ntBASIC16.53■□□□□ 0.24
Syn1O88935 Gm43767-201ENSMUST00000198933 381 ntBASIC16.53■□□□□ 0.24
Syn1O88935 Gm45167-201ENSMUST00000208007 322 ntBASIC16.53■□□□□ 0.24
Syn1O88935 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.53■□□□□ 0.24
Syn1O88935 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.53■□□□□ 0.24
Syn1O88935 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Syn1O88935 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.53■□□□□ 0.24
Syn1O88935 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syn1O88935 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.52■□□□□ 0.24
Syn1O88935 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.52■□□□□ 0.24
Syn1O88935 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Syn1O88935 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Syn1O88935 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.52■□□□□ 0.24
Syn1O88935 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Syn1O88935 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Syn1O88935 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syn1O88935 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.52■□□□□ 0.23
Syn1O88935 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syn1O88935 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Syn1O88935 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syn1O88935 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Syn1O88935 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms