Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hdac3O88895 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hdac3O88895 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hdac3O88895 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.44□□□□□ -0.1
Hdac3O88895 Gm7213-201ENSMUST00000215977 950 ntBASIC14.44□□□□□ -0.1
Hdac3O88895 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.44□□□□□ -0.1
Hdac3O88895 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hdac3O88895 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hdac3O88895 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.43□□□□□ -0.1
Hdac3O88895 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.43□□□□□ -0.1
Hdac3O88895 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hdac3O88895 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.43□□□□□ -0.1
Hdac3O88895 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hdac3O88895 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.43□□□□□ -0.1
Hdac3O88895 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.43□□□□□ -0.1
Hdac3O88895 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hdac3O88895 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hdac3O88895 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hdac3O88895 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac3O88895 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.42□□□□□ -0.1
Hdac3O88895 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hdac3O88895 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hdac3O88895 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hdac3O88895 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.42□□□□□ -0.1
Hdac3O88895 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.42□□□□□ -0.1
Hdac3O88895 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac3O88895 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms