Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6bO35451 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.03□□□□□ -0.16
Atf6bO35451 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6bO35451 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6bO35451 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6bO35451 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Atf6bO35451 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6bO35451 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6bO35451 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6bO35451 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6bO35451 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atf6bO35451 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Atf6bO35451 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6bO35451 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6bO35451 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6bO35451 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.02□□□□□ -0.17
Atf6bO35451 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.02□□□□□ -0.17
Atf6bO35451 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.02□□□□□ -0.17
Atf6bO35451 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Atf6bO35451 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.02□□□□□ -0.17
Atf6bO35451 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Atf6bO35451 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Atf6bO35451 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Atf6bO35451 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6bO35451 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atf6bO35451 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Atf6bO35451 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atf6bO35451 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atf6bO35451 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.01□□□□□ -0.17
Atf6bO35451 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.01□□□□□ -0.17
Atf6bO35451 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atf6bO35451 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.01□□□□□ -0.17
Atf6bO35451 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.01□□□□□ -0.17
Atf6bO35451 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Atf6bO35451 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6bO35451 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Atf6bO35451 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Atf6bO35451 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Atf6bO35451 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Atf6bO35451 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14□□□□□ -0.17
Atf6bO35451 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Atf6bO35451 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14□□□□□ -0.17
Atf6bO35451 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14□□□□□ -0.17
Atf6bO35451 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14□□□□□ -0.17
Atf6bO35451 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6bO35451 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14□□□□□ -0.17
Atf6bO35451 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Atf6bO35451 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Atf6bO35451 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Atf6bO35451 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Atf6bO35451 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.99□□□□□ -0.17
Atf6bO35451 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Atf6bO35451 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Atf6bO35451 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Atf6bO35451 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.99□□□□□ -0.17
Atf6bO35451 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf6bO35451 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms