Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11bO08712 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11bO08712 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Gm22697-201ENSMUST00000175194 63 ntBASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11bO08712 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11bO08712 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Prob1-201ENSMUST00000097619 3021 ntBASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Gm6433-201ENSMUST00000118634 875 ntBASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Gm18101-201ENSMUST00000215769 548 ntBASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.36■□□□□ 0.21
Tnfrsf11bO08712 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms