Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Gm5864-201ENSMUST00000202263 970 ntBASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb9E9Q5G2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Gm4459-201ENSMUST00000118750 468 ntBASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Gm6296-201ENSMUST00000222599 943 ntBASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb9E9Q5G2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb9E9Q5G2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Gm12497-201ENSMUST00000138778 237 ntBASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms