Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC8.46□□□□□ -1.06
Ubr4A2AN08 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC8.46□□□□□ -1.06
Ubr4A2AN08 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ubr4A2AN08 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm13294-201ENSMUST00000121757 1330 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm6415-201ENSMUST00000118488 348 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm29541-201ENSMUST00000191351 678 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm10478-201ENSMUST00000084451 396 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm12017-201ENSMUST00000122453 1003 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm8099-201ENSMUST00000200510 742 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm42466-201ENSMUST00000202099 1301 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm6203-201ENSMUST00000209575 1342 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Gm6018-201ENSMUST00000216090 1306 ntBASIC8.45□□□□□ -1.06
Ubr4A2AN08 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ubr4A2AN08 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Gm11918-201ENSMUST00000121660 179 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC8.44□□□□□ -1.06
Ubr4A2AN08 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Gm5523-201ENSMUST00000180415 997 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 Gm4857-201ENSMUST00000192718 785 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC8.44□□□□□ -1.06
Ubr4A2AN08 AC124603.1-201ENSMUST00000223843 308 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 CT025555.1-201ENSMUST00000225901 1217 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Slc35b2-202ENSMUST00000223987 1766 ntBASIC8.44□□□□□ -1.06
Ubr4A2AN08 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms