Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lnp1A0A1B0GSK3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lnp1A0A1B0GSK3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm23634-201ENSMUST00000175071 91 ntBASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm36967-201ENSMUST00000193814 266 ntBASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lnp1A0A1B0GSK3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.42□□□□□ -0.26
Lnp1A0A1B0GSK3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms