Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mir7071-201ENSMUST00000184847 69 ntBASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm29707-201ENSMUST00000196325 491 ntBASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm37722-201ENSMUST00000193757 208 ntBASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms