Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-47A0A0A6YY41 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-47A0A0A6YY41 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-47A0A0A6YY41 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-47A0A0A6YY41 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm27389-201ENSMUST00000183622 195 ntBASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Ighv1-47A0A0A6YY41 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm26039-201ENSMUST00000158152 144 ntBASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.32□□□□□ -0.28
Ighv1-47A0A0A6YY41 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.31□□□□□ -0.28
Ighv1-47A0A0A6YY41 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms