Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12d-3A0A075B6A4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12d-3A0A075B6A4 Flg-201ENSMUST00000050758 1488 ntBASIC12.08□□□□□ -0.47
Trav12d-3A0A075B6A4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12d-3A0A075B6A4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.08□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-3A0A075B6A4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Mir6349-201ENSMUST00000184059 97 ntBASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-3A0A075B6A4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms