Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-4A0A075B654 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Gm19721-201ENSMUST00000195284 1764 ntBASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-4A0A075B654 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 AC131586.2-201ENSMUST00000228370 1512 ntBASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-4A0A075B654 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms