Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Gm12933-201ENSMUST00000120203 872 ntBASIC12.52□□□□□ -0.41
Trav16A0A075B653 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav16A0A075B653 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16A0A075B653 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Gm27405-201ENSMUST00000184201 112 ntBASIC12.51□□□□□ -0.41
Trav16A0A075B653 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav16A0A075B653 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav16A0A075B653 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16A0A075B653 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav16A0A075B653 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav16A0A075B653 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16A0A075B653 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.48□□□□□ -0.41
Trav16A0A075B653 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16A0A075B653 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16A0A075B653 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16A0A075B653 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav16A0A075B653 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms