Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-2A0A075B638 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gm7638-201ENSMUST00000121348 967 ntBASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gm27405-201ENSMUST00000184201 112 ntBASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-2A0A075B638 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-2A0A075B638 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms