Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm10033-202ENSMUST00000211874 928 ntBASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16d-dv11A0A075B617 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav16d-dv11A0A075B617 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16d-dv11A0A075B617 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms