Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav1A0A075B5Z4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Mir770-201ENSMUST00000103252 94 ntBASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Gm10013-201ENSMUST00000106074 672 ntBASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav1A0A075B5Z4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav1A0A075B5Z4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Gm9013-201ENSMUST00000132939 882 ntBASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms