Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC104072.1-201ENST00000568817 668 ntBASIC0.21□□□□□ -2.38
HLA-DRB4X5D2U9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.21□□□□□ -2.38
HLA-DRB4X5D2U9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-DRB4X5D2U9 AC099654.8-201ENST00000637757 681 ntBASIC0.21□□□□□ -2.38
HLA-DRB4X5D2U9 Y_RNA.122-201ENST00000363331 96 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 SNORA32.2-201ENST00000384049 122 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 MIR10A-201ENST00000385043 110 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AL359704.1-201ENST00000411586 781 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AL445305.1-201ENST00000432577 575 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AL158053.1-201ENST00000441503 453 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 PAXBP1P1-201ENST00000449315 447 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AL139824.2-201ENST00000458731 1095 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-677P-201ENST00000516914 101 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AL353778.1-201ENST00000603149 408 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AL031281.1-201ENST00000604049 488 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AC026741.1-201ENST00000605892 482 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 AC023158.2-201ENST00000614876 543 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 SNORD3E-202ENST00000627253 216 ntBASIC0.2□□□□□ -2.38
HLA-DRB4X5D2U9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 RNU4-15P-201ENST00000362613 141 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 SNORA12.2-201ENST00000391040 156 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC113410.1-201ENST00000505029 247 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 Y_RNA.687-201ENST00000516558 91 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 MIR3136-201ENST00000583498 78 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC112191.3-201ENST00000604371 277 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC006270.3-201ENST00000605967 1036 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC124016.2-201ENST00000610058 665 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 AC021506.2-201ENST00000612354 169 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
HLA-DRB4X5D2U9 Y_RNA.408-201ENST00000383987 102 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 UBE2V1P15-201ENST00000407776 448 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 MTND4P20-201ENST00000424125 869 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 RPL23AP95-201ENST00000426806 265 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 MTCO2P12-201ENST00000427426 682 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 AP000542.1-201ENST00000448473 371 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 NDUFB1P2-201ENST00000449477 176 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 AC091435.1-201ENST00000505442 584 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 AC105758.1-201ENST00000506038 399 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-1041P-201ENST00000516254 102 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 SNORA59B-202ENST00000578183 701 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 AL138889.2-201ENST00000603883 242 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 AC012557.2-201ENST00000605919 418 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 MIR6515-201ENST00000619843 57 ntBASIC0.18□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-534P-201ENST00000364877 106 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 RPS3AP36-201ENST00000398190 775 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 TIMM9P2-201ENST00000419324 266 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AL596276.1-201ENST00000434465 418 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 FABP5P4-201ENST00000437203 171 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AC093899.1-201ENST00000457984 376 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AC092991.1-201ENST00000477176 376 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 RNA5SP436-201ENST00000516020 115 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AC115990.1-201ENST00000526957 301 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AL034555.1-201ENST00000604816 211 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 MIR15A-201ENST00000607334 83 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 AC008147.4-201ENST00000617570 1204 ntBASIC0.17□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-37P-201ENST00000362692 107 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 RNU5A-8P-201ENST00000364102 114 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-11P-201ENST00000364234 107 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 MTCO1P17-201ENST00000411522 491 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL953862.1-201ENST00000423016 168 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 RPS20P10-201ENST00000451209 253 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AC233266.1-201ENST00000454518 96 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL162395.1-201ENST00000457882 422 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 snoU13.18-201ENST00000459483 104 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 RPS26P48-201ENST00000491713 339 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 RN7SKP12-201ENST00000516275 143 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL136520.1-202ENST00000555494 763 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL512347.1-201ENST00000566420 503 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 MIR3912-201ENST00000577566 105 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL513534.2-201ENST00000603836 250 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AL022154.1-201ENST00000604698 785 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AC242852.1-201ENST00000612151 96 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AC093913.1-201ENST00000614178 329 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AC244015.1-201ENST00000622301 99 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 AC024940.5-201ENST00000622889 474 ntBASIC0.16□□□□□ -2.38
HLA-DRB4X5D2U9 RNU6-777P-201ENST00000364265 104 ntBASIC0.15□□□□□ -2.39
HLA-DRB4X5D2U9 SMIM11P1-201ENST00000369586 178 ntBASIC0.15□□□□□ -2.39
HLA-DRB4X5D2U9 RNU6-354P-201ENST00000383862 107 ntBASIC0.15□□□□□ -2.39
HLA-DRB4X5D2U9 RNU6-610P-201ENST00000384264 107 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms