Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 RPL23AP30-201ENST00000432419 501 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 HSPE1P9-201ENST00000440046 311 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AL133373.1-201ENST00000497098 94 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 SUMO2P18-201ENST00000518873 252 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-1285P-201ENST00000363480 105 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-142P-201ENST00000384019 107 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-1245P-201ENST00000411130 106 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 SNX2P2-201ENST00000424553 323 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 HSPE1P13-201ENST00000451143 297 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 RNU2-10P-201ENST00000516375 211 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AC078795.2-201ENST00000602835 1252 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 MIR2909-201ENST00000617113 69 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AC006927.4-201ENST00000639187 543 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 AC073544.1-201ENST00000600110 1595 ntBASIC0.65□□□□□ -2.3
SCN10AQ9Y5Y9 AC092104.1-201ENST00000497346 1441 ntBASIC0.65□□□□□ -2.3
SCN10AQ9Y5Y9 VPS26BP1-201ENST00000417155 755 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC099677.2-201ENST00000436385 175 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AL008629.1-201ENST00000438615 184 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC006026.2-201ENST00000457376 180 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC119751.4-201ENST00000507498 357 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 Y_RNA.687-201ENST00000516558 91 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 CENPUP1-201ENST00000526649 1202 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 MIR3146-201ENST00000580367 79 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-87P-201ENST00000607561 108 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AL512427.1-201ENST00000618593 349 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AL109933.3-201ENST00000619095 188 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 OR4G3P-201ENST00000633500 913 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC103706.2-201ENST00000638080 240 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC010615.1-201ENST00000594254 1764 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 Y_RNA.472-201ENST00000384322 102 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 Y_RNA.578-201ENST00000390903 88 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-293P-201ENST00000411259 106 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 MTCO3P41-201ENST00000414801 328 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 SNORA31.4-201ENST00000516049 129 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 BNIP3P6-201ENST00000549284 499 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AL442163.3-201ENST00000554110 156 ntBASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN10AQ9Y5Y9 RNU5E-7P-201ENST00000365290 117 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 ARL5AP1-201ENST00000418991 388 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 RPL31P35-201ENST00000431058 377 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AC097473.1-201ENST00000508142 408 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 RNA5SP481-201ENST00000516814 122 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 MIR3136-201ENST00000583498 78 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AC008507.2-201ENST00000588402 1176 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-1192P-201ENST00000612197 107 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-489P-201ENST00000618289 107 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 AC004808.1-201ENST00000627671 721 ntBASIC0.64□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-212P-201ENST00000362642 104 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RNY4P24-201ENST00000362735 96 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RNU4-56P-201ENST00000364700 142 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC069282.1-201ENST00000411911 526 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC123900.1-201ENST00000420390 96 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC007969.2-201ENST00000441891 191 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RPS27AP8-201ENST00000452665 445 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC112206.3-201ENST00000514578 389 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 MTCYBP33-201ENST00000575007 1130 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC091135.1-201ENST00000585943 307 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC024060.1-201ENST00000607052 494 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 Y_RNA.132-201ENST00000363421 102 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 MIR100-201ENST00000385259 80 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RPS3AP36-201ENST00000398190 775 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AL353777.1-201ENST00000425552 326 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RPS20P10-201ENST00000451209 253 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AL139824.2-201ENST00000458731 1095 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 snoU13.30-201ENST00000458951 104 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 HMGN2P9-201ENST00000476875 229 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AK3P2-201ENST00000507976 429 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 SNORD60.2-201ENST00000516883 86 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AL021879.1-201ENST00000611756 288 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RMST_4.1-201ENST00000616886 107 ntBASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms