Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 RNA5SP124-201ENST00000362739 110 ntBASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-450P-201ENST00000364654 107 ntBASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 AC007395.1-201ENST00000451333 677 ntBASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 PCNPP5-201ENST00000452246 481 ntBASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-579P-201ENST00000516879 102 ntBASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.67□□□□□ -1.66
GTF3C3Q9Y5Q9 MTND5P35-201ENST00000557537 1720 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-944P-201ENST00000364023 107 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-318P-201ENST00000384283 103 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 RN7SKP123-201ENST00000410732 291 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 DPH3P2-201ENST00000422618 250 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AL445305.1-201ENST00000432577 575 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AC010095.1-201ENST00000443543 144 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 UBBP3-201ENST00000445497 241 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 RN7SKP21-201ENST00000516503 220 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-1012P-201ENST00000516606 109 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 SNORD11B-201ENST00000607707 90 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AC010205.1-201ENST00000616668 449 ntBASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.66□□□□□ -1.66
GTF3C3Q9Y5Q9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
GTF3C3Q9Y5Q9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.65□□□□□ -1.66
GTF3C3Q9Y5Q9 RNA5SP317-201ENST00000410176 116 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU2-32P-201ENST00000411193 191 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-1001P-201ENST00000411265 100 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RNA5SP311-201ENST00000411290 116 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC244505.4-201ENST00000434905 287 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 SSXP5-201ENST00000443473 287 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 H2AFZP6-201ENST00000444403 394 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC073910.1-201ENST00000445047 438 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC074133.1-201ENST00000515696 183 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RNA5SP315-201ENST00000516340 116 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-56P-201ENST00000516986 93 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RNA5SP312-201ENST00000517068 116 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC022616.8-201ENST00000533569 253 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC023824.2-201ENST00000566185 400 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 MIR4506-201ENST00000584693 77 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC011944.2-201ENST00000624440 683 ntBASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
GTF3C3Q9Y5Q9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 AC000403.1-201ENST00000613696 3585 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 SNORD56.5-201ENST00000364281 72 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-708P-201ENST00000384217 107 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 MIR549A-201ENST00000385268 96 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 MRPL35P1-201ENST00000404272 572 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-1143P-201ENST00000516125 104 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 RN7SKP40-201ENST00000517211 242 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 AC107934.2-201ENST00000518653 310 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 AL162730.1-201ENST00000605734 292 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 U6.92-201ENST00000636464 89 ntBASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.64□□□□□ -1.67
GTF3C3Q9Y5Q9 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-234P-201ENST00000365229 104 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 Y_RNA.439-201ENST00000384119 94 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 ARL5AP4-201ENST00000430731 512 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 AC108043.1-201ENST00000512696 574 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 MIR4659A-201ENST00000580269 81 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 MIR4436B2-201ENST00000581415 91 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 AC090616.3-201ENST00000582184 217 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 MIR4436B1-201ENST00000583272 91 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 AC023043.3-201ENST00000593113 385 ntBASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GTF3C3Q9Y5Q9 Y_RNA.458-201ENST00000384240 102 ntBASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 RNU6-1026P-201ENST00000384465 108 ntBASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 MIR300-201ENST00000401138 83 ntBASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 AL033519.2-201ENST00000403958 392 ntBASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 AC240442.1-201ENST00000616055 283 ntBASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF3C3Q9Y5Q9 U4atac.1-201ENST00000618345 95 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms