Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 RPS26P42-201ENST00000413485 326 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 AL358453.1-201ENST00000422522 250 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 CBX3P6-201ENST00000430257 527 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 RN7SKP210-201ENST00000459176 261 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 RPL7P42-201ENST00000481005 679 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 AC083906.5-201ENST00000503722 328 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 APOOP3-201ENST00000536787 586 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 AC078899.3-201ENST00000599065 212 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 U3.9-201ENST00000363823 204 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 Y_RNA.473-201ENST00000384333 102 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 SNORA46.1-201ENST00000391069 153 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 RNA5SP201-201ENST00000410316 124 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AC243428.1-201ENST00000421099 264 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 RPL23AP50-201ENST00000434149 455 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 RPL21P2-201ENST00000440049 481 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AP001486.1-201ENST00000463339 476 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AC087477.1-201ENST00000465747 340 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 RPS29P26-201ENST00000477483 171 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AL049873.1-201ENST00000480540 376 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AC090096.1-201ENST00000489168 390 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 RPL23AP75-201ENST00000491601 451 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 Y_RNA.675-201ENST00000516389 149 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 RNA5SP380-201ENST00000517190 98 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AC107016.2-201ENST00000547968 190 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AL117336.2-201ENST00000602435 335 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
COL4A3BPQ9Y5P4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 Z82209.1-201ENST00000422141 2135 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6-595P-201ENST00000363944 107 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 SNORD115-32-201ENST00000364079 82 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 MIR634-201ENST00000385208 97 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AC107083.1-201ENST00000439643 279 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AF186996.7-201ENST00000492781 209 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AL590705.4-201ENST00000532209 134 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 AC018630.3-201ENST00000542637 96 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
COL4A3BPQ9Y5P4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.67-201ENST00000362870 100 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORA80A-201ENST00000363922 136 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORA41-201ENST00000384675 132 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 RNY4P36-201ENST00000391116 96 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.632-201ENST00000459189 102 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AC097473.1-201ENST00000508142 408 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 SCARNA13-201ENST00000516672 275 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 CBX3P8-201ENST00000532412 525 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AL158827.2-201ENST00000602494 330 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AL033523.1-201ENST00000605153 153 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 RMST_6.1-201ENST00000611980 203 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AC104985.2-201ENST00000620598 500 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 AL691447.3-201ENST00000635020 330 ntBASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A3BPQ9Y5P4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU1-109P-201ENST00000383960 147 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.404-201ENST00000383978 102 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC009969.1-201ENST00000438726 172 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC011816.1-201ENST00000441346 546 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC025750.2-201ENST00000442609 450 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 RPL30P15-201ENST00000457129 321 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms