Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC006157.1-201ENST00000611750 366 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 AC099654.10-201ENST00000640395 161 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 SNORA33.2-201ENST00000365413 134 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-639P-201ENST00000384074 107 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-17P-201ENST00000384245 107 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-18P-201ENST00000384527 107 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 SNORA69.1-201ENST00000390904 137 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 UBA52P6-201ENST00000399822 382 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.605-201ENST00000410577 105 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 EIF4EP4-201ENST00000424916 578 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 MTND4P19-201ENST00000446659 478 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 OR2AQ1P-201ENST00000451972 200 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AL121594.1-201ENST00000475906 575 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-911P-201ENST00000516523 104 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 SCARNA3-201ENST00000517097 143 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 MIR3616-201ENST00000584070 92 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AC092447.9-201ENST00000603395 144 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 Z98751.3-201ENST00000604447 521 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AL034555.1-201ENST00000604816 211 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AC016925.2-201ENST00000605108 242 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA3Q9Y5H0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.80-201ENST00000362996 102 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 SNORD56.3-201ENST00000363507 71 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.364-201ENST00000365532 101 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 SNORA22B-201ENST00000383876 138 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-120P-201ENST00000516077 103 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 RNA5SP54-201ENST00000516951 92 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 CBX3P7-201ENST00000532876 502 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AC005520.5-201ENST00000613926 164 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 AL450472.1-202ENST00000637286 180 ntBASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGA3Q9Y5H0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 RNY1P14-201ENST00000384426 108 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.526-201ENST00000384572 110 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 MIR32-201ENST00000384965 70 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 MIR320B2-201ENST00000408479 138 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 MTCO3P19-201ENST00000415864 321 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AF186996.7-201ENST00000492781 209 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 AL606534.2-204ENST00000635008 178 ntBASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA3Q9Y5H0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 AC080013.2-201ENST00000460866 323 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 AP001486.1-201ENST00000463339 476 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 AC105758.1-201ENST00000506038 399 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.721-201ENST00000517207 102 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 COX6CP5-201ENST00000527162 228 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 AC010928.2-201ENST00000588017 287 ntBASIC3.17□□□□□ -1.9
PCDHGA3Q9Y5H0 VN1R91P-201ENST00000594377 169 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms