Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 COX6CP5-201ENST00000527162 228 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR4298-201ENST00000584380 73 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC010928.2-201ENST00000588017 287 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 VN1R91P-201ENST00000594377 169 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC016727.2-201ENST00000603988 621 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 AC068647.1-201ENST00000489539 2265 ntBASIC3.17□□□□□ -1.9
PCDHGA9Q9Y5G4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORD115-8-201ENST00000363856 82 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORD115-38-201ENST00000365037 82 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-308P-201ENST00000390957 107 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC114482.1-201ENST00000418010 247 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 MRPS18CP6-201ENST00000423587 223 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 ANXA2P1-201ENST00000505539 926 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORA40.14-201ENST00000516543 86 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORA31.16-201ENST00000516773 139 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 ANP32BP3-201ENST00000559213 706 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC022432.1-201ENST00000595739 310 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 RPL30P11-203ENST00000598995 310 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AL355802.3-201ENST00000607571 545 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC069294.1-201ENST00000608397 350 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR1244-1-201ENST00000612829 85 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC022149.2-201ENST00000621061 203 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR1244-3-201ENST00000635744 85 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR1244-2-201ENST00000636449 85 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR1244-4-202ENST00000636813 85 ntBASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA9Q9Y5G4 AC005592.1-201ENST00000566527 1640 ntBASIC3.15□□□□□ -1.9
PCDHGA9Q9Y5G4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHGA9Q9Y5G4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 AC069528.2-201ENST00000624849 1991 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RNA5SP374-201ENST00000362939 125 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.162-201ENST00000363683 102 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU4-42P-201ENST00000364738 142 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.496-201ENST00000384444 101 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR628-201ENST00000385229 95 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 MRPL42P3-201ENST00000401492 326 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 MTCO3P29-201ENST00000432119 779 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 Z82188.1-201ENST00000436709 154 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 GSTA11P-201ENST00000452866 669 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 AP001486.1-201ENST00000463339 476 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 S100A11P2-201ENST00000467589 312 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 AC090617.3-201ENST00000573670 475 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 AL078605.1-201ENST00000603529 500 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RPL17P51-201ENST00000605218 238 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 PART1_1.1-201ENST00000611761 217 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA9Q9Y5G4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.148-201ENST00000363557 117 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 SNORA36A-201ENST00000384221 132 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR208B-201ENST00000401172 77 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC073901.1-201ENST00000462471 408 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC021205.2-201ENST00000480069 347 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC093852.1-201ENST00000503587 266 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 SCARNA15.1-201ENST00000516384 125 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC073657.2-201ENST00000605661 303 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC007485.1-201ENST00000616755 206 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 AC087588.2-201ENST00000617667 426 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 U2.1-201ENST00000618978 145 ntBASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHGA9Q9Y5G4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms