Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-529P-201ENST00000363383 104 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 MIR548D2-201ENST00000384955 97 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 MIR1271-201ENST00000408537 86 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AC245291.1-201ENST00000419501 328 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 NDUFB4P6-201ENST00000436819 366 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 RPS26P2-201ENST00000440331 348 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 NIP7P2-201ENST00000485801 544 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AC096725.1-201ENST00000514266 313 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-1018P-201ENST00000516577 106 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AC107934.2-201ENST00000518653 310 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 MIR4436B2-201ENST00000581415 91 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 MIR4436B1-201ENST00000583272 91 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AC068870.2-201ENST00000620635 389 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AL136164.3-201ENST00000624429 3978 ntBASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 RNU6-1209P-201ENST00000363655 107 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 Y_RNA.796-201ENST00000364268 102 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 Y_RNA.799-201ENST00000364992 102 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 MT-TI-201ENST00000387365 69 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 TOMM22P1-201ENST00000418578 312 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 RPS27P18-201ENST00000431701 247 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 SNORD65B-201ENST00000459126 73 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 RNU7-171P-201ENST00000459581 62 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 RPS26P48-201ENST00000491713 339 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 RNU7-61P-201ENST00000515897 61 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 SCARNA15-202ENST00000516881 127 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 HSPE1P7-201ENST00000604681 321 ntBASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS9D1Q9Y2B5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 INTS6P1-201ENST00000504674 2530 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 Y_RNA.40-201ENST00000362645 93 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 MIR195-201ENST00000385194 87 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AL139095.1-201ENST00000404326 391 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 Y_RNA.601-201ENST00000410500 113 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC245102.2-201ENST00000448956 180 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 RPS29P20-201ENST00000489592 171 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC097462.1-201ENST00000514125 324 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 HSPE1P18-201ENST00000517602 280 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC022726.1-201ENST00000587475 207 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS9D1Q9Y2B5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AL139811.1-201ENST00000424779 2299 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 MAPK10-303ENST00000641324 3959 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 SNORA51.4-201ENST00000364993 124 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 MIR3065-201ENST00000390137 79 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 RNA5SP354-201ENST00000391247 136 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AL451046.2-201ENST00000403074 277 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 snoU13.14-201ENST00000459372 104 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 RNA5SP57-201ENST00000459463 123 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 HMGN2P9-201ENST00000476875 229 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AC105137.1-201ENST00000484355 562 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 RN7SKP209-201ENST00000516888 304 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 RNA5SP392-201ENST00000516905 112 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AC008033.2-201ENST00000542626 177 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 MIR5699-201ENST00000578903 90 ntBASIC4.75□□□□□ -1.65
VPS9D1Q9Y2B5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms