Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 MIR3146-201ENST00000580367 79 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC007363.1-201ENST00000604736 620 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC092106.3-201ENST00000611308 722 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AL021879.1-201ENST00000611756 288 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 RNA5SP457-201ENST00000363657 124 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 Y_RNA.578-201ENST00000390903 88 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 RPS3AP36-201ENST00000398190 775 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 RNU2-3P-201ENST00000410144 191 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 MTCO3P41-201ENST00000414801 328 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 ARL5AP1-201ENST00000418991 388 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AL353777.1-201ENST00000425552 326 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 HMGN2P9-201ENST00000476875 229 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC112206.3-201ENST00000514578 389 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 RNA5SP330-201ENST00000517096 96 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 CENPUP1-201ENST00000526649 1202 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC136932.1-201ENST00000574771 208 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 MIR3136-201ENST00000583498 78 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AL512506.1-201ENST00000613918 449 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AL356596.1-201ENST00000624230 379 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 RNA5SP62-201ENST00000363457 110 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 RNU6-1285P-201ENST00000363480 105 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 RNU6-723P-201ENST00000383973 107 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 SNX2P2-201ENST00000424553 323 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AL358176.2-201ENST00000425769 204 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 HSPE1P9-201ENST00000440046 311 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC006026.2-201ENST00000457376 180 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 RNU2-10P-201ENST00000516375 211 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 SNORD60.2-201ENST00000516883 86 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC109446.1-201ENST00000566172 220 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AL590229.1-201ENST00000603497 542 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 MIR3976-201ENST00000606807 139 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC010615.1-201ENST00000594254 1764 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 RNU6-212P-201ENST00000362642 104 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 HSPE1P13-201ENST00000451143 297 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 snoU13.30-201ENST00000458951 104 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC067942.3-201ENST00000512025 362 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 MTND2P7-201ENST00000521337 640 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC010376.1-201ENST00000522101 334 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AL031775.1-201ENST00000607014 887 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 RNU6-87P-201ENST00000607561 108 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 AC120349.3-201ENST00000624377 529 ntBASIC0.56□□□□□ -2.32
SCN8AQ9UQD0 Y_RNA.295-201ENST00000364918 102 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 RNA5SP511-201ENST00000410487 115 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 RAB28P5-201ENST00000427490 651 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 ART2BP-201ENST00000453501 499 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AC074344.1-201ENST00000512823 224 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 BNIP3P16-201ENST00000589779 534 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AC090578.1-201ENST00000604955 591 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AC072039.2-201ENST00000608883 439 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 AL353149.1-201ENST00000610667 244 ntBASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.55□□□□□ -2.32
SCN8AQ9UQD0 RNY4P24-201ENST00000362735 96 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 RNU6-511P-201ENST00000363496 107 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 Y_RNA.251-201ENST00000364551 99 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 MIR200A-201ENST00000384875 90 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 RNU6-293P-201ENST00000411259 106 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC069282.1-201ENST00000411911 526 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC007969.2-201ENST00000441891 191 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC097473.1-201ENST00000508142 408 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 RNA5SP481-201ENST00000516814 122 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC107934.1-201ENST00000522215 217 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 ADI1P3-201ENST00000549509 470 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC105129.3-201ENST00000605455 485 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC024060.1-201ENST00000607052 494 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 Y_RNA.258-201ENST00000364613 105 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 RNU6-910P-201ENST00000390844 107 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 MRPL35P1-201ENST00000404272 572 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms