Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC098657.3-201ENST00000620434 263 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 AL160413.1-201ENST00000622780 310 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 HAUS6P2-201ENST00000433254 2404 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 AL359854.1-201ENST00000614203 1594 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RNU6-1317P-201ENST00000364582 104 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 Y_RNA.813-201ENST00000364639 102 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RNU6-336P-201ENST00000364891 107 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RNU6-306P-201ENST00000384617 107 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 MIR518C-201ENST00000384822 101 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RNY4P36-201ENST00000391116 96 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RNU6-1050P-201ENST00000410388 107 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AC011816.1-201ENST00000441346 546 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 Y_RNA.653-201ENST00000459091 95 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AC008571.1-201ENST00000467232 300 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 MED28P2-201ENST00000475771 317 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 SCARNA3-201ENST00000517097 143 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 APOOP3-201ENST00000536787 586 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 CPDP1-201ENST00000579660 283 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 MIR4765-201ENST00000585007 77 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 BNIP3P16-201ENST00000589779 534 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 AC084781.2-201ENST00000615568 161 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 MIR6733-201ENST00000635723 61 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 MTND4LP32-201ENST00000636111 270 ntBASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDK11AQ9UQ88 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 VTRNA1-1-201ENST00000363120 99 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 RNU6-1188P-201ENST00000363795 107 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 RNU4-53P-201ENST00000410828 140 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 RNU7-26P-201ENST00000458980 63 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 AC090096.1-201ENST00000489168 390 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 AC026782.1-201ENST00000512952 449 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 RNA5SP76-201ENST00000516277 87 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 KPNA2P1-201ENST00000458289 1591 ntBASIC4□□□□□ -1.77
CDK11AQ9UQ88 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4□□□□□ -1.77
CDK11AQ9UQ88 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK11AQ9UQ88 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 RNA5SP289-201ENST00000362332 137 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 SNORA75.4-201ENST00000391278 119 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 SNORD88.1-201ENST00000408684 91 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 AC074117.2-201ENST00000417130 397 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 snoU13.26-201ENST00000459452 105 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 RNA5SP112-201ENST00000515937 99 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 RNU6-307P-201ENST00000516743 106 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 AP005902.1-201ENST00000521358 186 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 AC023824.2-201ENST00000566185 400 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 AP000654.2-201ENST00000605633 586 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 AC024581.2-201ENST00000619986 252 ntBASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
CDK11AQ9UQ88 RNU6-486P-201ENST00000363116 107 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 SNORD116-29-201ENST00000384516 83 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 RNU6-220P-201ENST00000390919 107 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 Y_RNA.594-201ENST00000410373 140 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AL135786.1-201ENST00000415892 214 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 MTND1P14-201ENST00000427400 950 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 USP9YP30-201ENST00000430729 455 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AL133396.1-201ENST00000432048 687 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 RNU6-1170P-201ENST00000515974 106 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 RNU6-612P-201ENST00000516909 102 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AC005899.2-201ENST00000584353 90 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AC009229.3-201ENST00000608056 282 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AL669831.3-213ENST00000636676 183 ntBASIC3.98□□□□□ -1.77
CDK11AQ9UQ88 AL109809.4-201ENST00000603520 2185 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 RNU6-596P-201ENST00000365395 98 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 RNU6-843P-201ENST00000384454 104 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 MIR521-1-201ENST00000384902 87 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 RN7SL499P-201ENST00000481141 276 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 SRIP1-201ENST00000489235 288 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK11AQ9UQ88 PTP4A1P4-201ENST00000512479 322 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms