Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 MIR2276-201ENST00000516886 89 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RNU6-143P-201ENST00000516942 93 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 ERHP1-201ENST00000523006 310 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 TRAV28-201ENST00000557548 323 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 AC241585.2-209ENST00000638217 143 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 AC233981.2-201ENST00000611524 1614 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 RNU6-147P-201ENST00000383983 107 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.435-201ENST00000384095 112 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 RNU6-790P-201ENST00000384479 105 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 MIR153-1-201ENST00000384914 90 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 MIR184-201ENST00000384962 84 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 RPL21P90-201ENST00000415692 466 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 RNU6-1211P-201ENST00000459179 105 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 SNORA70.19-201ENST00000516717 90 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 AC104576.1-201ENST00000524225 88 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 MIR15A-201ENST00000607334 83 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 AC008873.1-201ENST00000625051 138 ntBASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL17A1Q9UMD9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 AC007785.2-201ENST00000598627 1916 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 ZNF658B-202ENST00000615961 3375 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 RNU6-290P-201ENST00000365212 101 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 RNU6-76P-201ENST00000384060 104 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 SNORD15B-201ENST00000384714 146 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 MIR708-201ENST00000390708 88 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 RNU2-61P-201ENST00000411069 191 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 RNA5SP31-201ENST00000411144 127 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 SSXP9-201ENST00000417503 292 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 AC007098.1-201ENST00000420122 367 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 MTND4LP9-201ENST00000427694 174 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 AL512844.2-201ENST00000433990 593 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 SNORA31.3-201ENST00000516029 96 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 RNU6-168P-201ENST00000516189 101 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 AC127455.1-201ENST00000565496 145 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 U6.92-201ENST00000636464 89 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 AC135776.4-201ENST00000624300 1904 ntBASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL17A1Q9UMD9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 RNU6-937P-201ENST00000384325 106 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.533-201ENST00000384596 114 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 RNU6-14P-201ENST00000384630 106 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 RNU6-882P-201ENST00000391025 103 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 Z98941.1-201ENST00000407764 100 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 RPL23AP67-201ENST00000465341 474 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 SNORD53-201ENST00000579969 78 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 MIR4282-201ENST00000583613 67 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 MIR548AC-201ENST00000585049 88 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 OR1M4P-201ENST00000589199 287 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 RNU6-85P-201ENST00000605989 107 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 MIR6129-201ENST00000616087 109 ntBASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL17A1Q9UMD9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 AC096644.4-201ENST00000563417 2912 ntBASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
COL17A1Q9UMD9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 RNU6-933P-201ENST00000384424 107 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AC087499.2-201ENST00000432861 149 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 HSPE1P25-201ENST00000455484 251 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 RPS29P21-201ENST00000496272 170 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AC090281.1-201ENST00000523019 276 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AC005951.2-201ENST00000576282 495 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 AL121917.1-203ENST00000605534 577 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.58□□□□□ -1.68
COL17A1Q9UMD9 SNORA22-201ENST00000383907 134 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 FTH1P6-201ENST00000430768 320 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 DAP3P1-201ENST00000441522 278 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms