Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 PIGFP2-201ENST00000421400 651 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC010975.2-201ENST00000427781 588 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 MTND1P18-201ENST00000448191 573 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 GMFBP1-201ENST00000467831 427 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC079382.1-201ENST00000493346 557 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC079140.5-201ENST00000507882 310 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 RNU2-69P-201ENST00000516061 100 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 RNA5SP490-201ENST00000517141 136 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 MIR3169-201ENST00000578032 83 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC091805.2-201ENST00000603848 235 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC107304.1-201ENST00000604229 296 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC010900.2-201ENST00000604508 210 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 uc_338.5-201ENST00000611839 155 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC091304.6-201ENST00000619761 202 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AP000770.2-201ENST00000623694 100 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 AC233981.2-201ENST00000611524 1614 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 MIR126-201ENST00000362291 85 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 U3.4-201ENST00000363352 213 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 RNU6-1127P-201ENST00000384580 107 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 RPS29P13-201ENST00000402041 169 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 MTND1P26-201ENST00000440488 538 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 HMGN2P18-201ENST00000450680 270 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 RPS27AP8-201ENST00000452665 445 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 RNVU1-2-201ENST00000516326 135 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 COPS8P3-201ENST00000526024 482 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC087441.2-201ENST00000529141 262 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AL590240.4-201ENST00000616908 390 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC091931.1-201ENST00000623488 728 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 AC009161.2-201ENST00000624626 138 ntBASIC1.6□□□□□ -2.15
CDH9Q9ULB4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH9Q9ULB4 ZNF680P1-201ENST00000436625 1469 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 RNU6-181P-201ENST00000363225 107 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 SNORD114-6-201ENST00000364393 72 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 RNU6-26P-201ENST00000383985 107 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 RNU6-606P-201ENST00000384721 111 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 SNORA16.2-201ENST00000390991 127 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AL117339.3-201ENST00000418733 162 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AL590135.1-201ENST00000422215 156 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC019205.3-201ENST00000424573 156 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC016700.2-201ENST00000446011 156 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 MTND3P7-201ENST00000474435 343 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC015911.1-201ENST00000495111 156 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC096745.1-201ENST00000509945 370 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 RNU6-445P-201ENST00000516949 107 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 SNORA25.17-201ENST00000517184 124 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AP002963.1-201ENST00000530590 184 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC010928.2-201ENST00000588017 287 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AC110760.3-201ENST00000598794 467 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AL356157.2-201ENST00000605122 111 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AL512598.1-201ENST00000610158 273 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
CDH9Q9ULB4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CDH9Q9ULB4 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 MIR378A-201ENST00000362177 66 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RNU4-13P-201ENST00000364019 141 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 Y_RNA.201-201ENST00000364052 96 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RNU4-56P-201ENST00000364700 142 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 SNORD32A-201ENST00000364805 84 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms