Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC022861.1-201ENST00000522981 663 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC107952.2-201ENST00000606048 486 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC092268.1-201ENST00000342691 405 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 SNORD116-13-201ENST00000384408 92 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 MIR610-201ENST00000385139 96 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 MIR140-201ENST00000385282 100 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 RNU6-177P-201ENST00000411257 104 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 AC073261.1-201ENST00000429409 121 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 TXNL1P1-201ENST00000429528 554 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 RPL31P54-201ENST00000429803 370 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 SNORA25.12-201ENST00000516202 82 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 RNU6-947P-201ENST00000516264 106 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 RN7SKP287-201ENST00000516546 266 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 AC004853.1-201ENST00000604902 698 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 AC013244.3-201ENST00000605614 388 ntBASIC-0.38□□□□□ -2.47
SCN11AQ9UI33 SNORA25.3-201ENST00000363205 127 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AL451054.2-201ENST00000420896 202 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 HMGB1P30-201ENST00000492455 606 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AC104136.1-201ENST00000512969 394 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 ACA59.2-201ENST00000517061 156 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 BNIP3P6-201ENST00000549284 499 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AL353778.1-201ENST00000603149 408 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AL590229.1-201ENST00000603497 542 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 AC104820.1-201ENST00000624183 307 ntBASIC-0.39□□□□□ -2.47
SCN11AQ9UI33 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RNU6-674P-201ENST00000363831 107 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RNU6-815P-201ENST00000384080 113 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RNY3P5-201ENST00000384127 102 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RNU6-658P-201ENST00000384606 106 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 MTCO1P21-201ENST00000416634 589 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AL353777.1-201ENST00000425552 326 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC109810.1-201ENST00000534066 224 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC097065.2-201ENST00000608159 533 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 MIR224-201ENST00000384889 81 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 MIR29B2-201ENST00000385055 81 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 MIR548B-201ENST00000385247 97 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AL357139.1-201ENST00000407792 426 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AL008629.1-201ENST00000438615 184 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 USP9YP22-201ENST00000438971 294 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 ELOCP24-201ENST00000456370 334 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RPF2P2-201ENST00000504693 896 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC116655.1-201ENST00000508324 901 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 AC091874.1-201ENST00000511402 339 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 VN1R83P-201ENST00000595685 445 ntBASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
SCN11AQ9UI33 RNU6-862P-201ENST00000362804 105 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 CBX3P9-201ENST00000402326 552 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 MTND4LP11-201ENST00000422184 280 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AC008628.1-201ENST00000508663 265 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AC116165.2-201ENST00000616705 206 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AL163051.2-201ENST00000618976 735 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AC092608.3-201ENST00000625017 386 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 MIR1248-201ENST00000629190 106 ntBASIC-0.41□□□□□ -2.47
SCN11AQ9UI33 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 ELOCP9-201ENST00000418624 239 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 SEPT7P5-201ENST00000434048 306 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 SEPT7P4-201ENST00000437076 306 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC010460.2-201ENST00000509054 677 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AL356057.1-201ENST00000533798 831 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC112187.2-201ENST00000604345 283 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC104985.3-201ENST00000623479 597 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 RNU4-48P-201ENST00000365559 182 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 MIR601-201ENST00000385256 79 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 MIR653-201ENST00000385279 96 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC016909.1-201ENST00000415916 166 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 MTCO2P1-201ENST00000424648 477 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC104332.1-201ENST00000440471 797 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms