Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MIR5004-201ENST00000579078 107 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MIR3149-201ENST00000584629 83 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MIR5701-1-201ENST00000585138 82 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 RNU6-91P-201ENST00000607774 107 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MIR5701-2-201ENST00000615634 82 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MIR7112-201ENST00000616126 65 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC007318.2-201ENST00000620999 243 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 U4.7-201ENST00000638126 106 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP25Q9UHP3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.38□□□□□ -1.87
USP25Q9UHP3 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 AC091812.1-201ENST00000432235 1948 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP25Q9UHP3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RNU6-78P-201ENST00000362897 107 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RNU4-42P-201ENST00000364738 142 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 Y_RNA.401-201ENST00000383965 117 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RNU6-843P-201ENST00000384454 104 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 SNORD116-20-201ENST00000384529 92 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RNU6-823P-201ENST00000391042 103 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RPL21P75-201ENST00000396599 483 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RPL21P28-201ENST00000401418 483 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RN7SKP220-201ENST00000410611 288 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AL139281.1-201ENST00000422120 335 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 AL353752.1-201ENST00000454946 260 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AP001324.2-201ENST00000461163 319 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RPL21P39-201ENST00000463605 483 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RN7SL807P-201ENST00000470923 297 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 FO393415.2-201ENST00000480085 343 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AC087190.1-201ENST00000484462 480 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AC093591.1-201ENST00000491435 481 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RPL21P16-201ENST00000495531 483 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 SNORA31.6-201ENST00000516241 130 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 RNU7-4P-201ENST00000516961 62 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AC022616.4-201ENST00000522985 181 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 VN1R107P-201ENST00000601784 209 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 AC016727.2-201ENST00000603988 621 ntBASIC3.37□□□□□ -1.87
USP25Q9UHP3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.37□□□□□ -1.87
USP25Q9UHP3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP25Q9UHP3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 MTND5P9-201ENST00000503854 1755 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP25Q9UHP3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 Y_RNA.176-201ENST00000363815 109 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 RNU6-595P-201ENST00000363944 107 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 MIR181A2-201ENST00000384863 110 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 MIR521-1-201ENST00000384902 87 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 MIR1302-3-201ENST00000408128 138 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 RNU6-101P-201ENST00000410323 104 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 AL731563.1-201ENST00000442202 214 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 U8.20-201ENST00000459445 131 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 RPS29P27-201ENST00000463711 170 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AK3P2-201ENST00000507976 429 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 RNU6-377P-201ENST00000515965 102 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 RNU6-612P-201ENST00000516909 102 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP25Q9UHP3 Z98751.3-201ENST00000604447 521 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AC138305.3-201ENST00000624988 240 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AL109809.4-201ENST00000603520 2185 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 AC010329.5-201ENST00000623497 2174 ntBASIC3.36□□□□□ -1.87
USP25Q9UHP3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.36□□□□□ -1.87
USP25Q9UHP3 RNU6-428P-201ENST00000362942 107 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 Y_RNA.193-201ENST00000363979 102 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 MIR625-201ENST00000385047 85 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 RNA5SP492-201ENST00000411330 114 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC114482.1-201ENST00000418010 247 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.35□□□□□ -1.87
USP25Q9UHP3 Z96811.1-201ENST00000445880 108 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 CHEK2P4-201ENST00000450340 246 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC093852.1-201ENST00000503587 266 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.35□□□□□ -1.87
USP25Q9UHP3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms