Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.03□□□□□ -1.92
EHD3Q9NZN3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
EHD3Q9NZN3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
EHD3Q9NZN3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
EHD3Q9NZN3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RNU4-50P-201ENST00000364361 141 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RNU4-9P-201ENST00000364951 139 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 SNORA51.4-201ENST00000364993 124 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 SNORA63.7-201ENST00000365579 123 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 MIR1289-1-201ENST00000408836 144 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RNA5SP38-201ENST00000410750 119 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AL714022.1-201ENST00000439897 151 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AC009296.1-201ENST00000443146 155 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RN7SL75P-201ENST00000461926 281 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AC091153.1-201ENST00000466297 402 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AP001025.1-201ENST00000486139 332 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RPL32P34-201ENST00000486380 400 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AF186996.7-201ENST00000492781 209 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 SNORA25.11-201ENST00000515935 105 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 ACA59.2-201ENST00000517061 156 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 RPL23AP88-201ENST00000605759 454 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 MIR8062-201ENST00000621515 85 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 SCARNA4-201ENST00000629045 128 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
EHD3Q9NZN3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
EHD3Q9NZN3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 Z75746.1-201ENST00000440243 2080 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RNU6-222P-201ENST00000362438 107 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 SNORD46.1-201ENST00000364139 104 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RNA5SP267-201ENST00000364893 126 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RNU6-198P-201ENST00000384258 104 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 MIR34B-201ENST00000385076 84 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AL139281.1-201ENST00000422120 335 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RPL23AP95-201ENST00000426806 265 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC005326.1-201ENST00000429197 123 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RN7SL601P-201ENST00000471221 293 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC010469.2-201ENST00000496412 480 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RNY3P15-201ENST00000516297 97 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 RNU6-897P-201ENST00000517135 105 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 MIR3944-201ENST00000581277 108 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC125232.2-201ENST00000592457 143 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC093010.3-201ENST00000570269 15214 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 AC091564.4-201ENST00000533934 2194 ntBASIC3.01□□□□□ -1.93
EHD3Q9NZN3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.01□□□□□ -1.93
EHD3Q9NZN3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
EHD3Q9NZN3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
EHD3Q9NZN3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
EHD3Q9NZN3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3□□□□□ -1.93
EHD3Q9NZN3 MIR208A-201ENST00000362287 71 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 Y_RNA.276-201ENST00000364732 109 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 SNORA29-201ENST00000384183 140 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RNU6-843P-201ENST00000384454 104 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 Y_RNA.504-201ENST00000384481 104 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RNU6-713P-201ENST00000384761 107 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 MIR32-201ENST00000384965 70 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 AL357075.1-201ENST00000404107 726 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RNU6-1140P-201ENST00000410517 106 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RNU4-47P-201ENST00000410876 114 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 Y_RNA.618-201ENST00000410949 107 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RNU6-130P-201ENST00000411112 103 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 AL590556.1-201ENST00000423231 483 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 USP9YP16-201ENST00000430287 407 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3□□□□□ -1.93
EHD3Q9NZN3 RPS15AP5-201ENST00000436276 388 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 AL161651.1-201ENST00000440882 223 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 RPEP5-201ENST00000441137 268 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 Z96811.1-201ENST00000445880 108 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 FCF1P4-201ENST00000448326 183 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3□□□□□ -1.93
EHD3Q9NZN3 USP9YP23-201ENST00000455085 407 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 BX510359.1-201ENST00000456973 237 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 AC087477.1-201ENST00000465747 340 ntBASIC3□□□□□ -1.93
EHD3Q9NZN3 AC109925.1-201ENST00000478069 331 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms