Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL139095.1-201ENST00000404326 391 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 MIR548P-201ENST00000408336 84 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RNU2-52P-201ENST00000410680 190 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC074117.2-201ENST00000417130 397 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC243428.1-201ENST00000421099 264 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 ARL5AP4-201ENST00000430731 512 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AL591043.1-201ENST00000432461 424 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RPL23AP50-201ENST00000434149 455 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RPS29P27-201ENST00000463711 170 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 RPL23AP70-201ENST00000483361 460 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC096725.1-201ENST00000514266 313 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 SCARNA15.1-201ENST00000516384 125 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 ACA59.2-201ENST00000517061 156 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 CR383656.8-201ENST00000549046 145 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 MIR4273-201ENST00000582824 84 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC018889.1-201ENST00000605372 397 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 AC133104.2-201ENST00000615272 193 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 uc_338.22-201ENST00000622722 187 ntBASIC2.6□□□□□ -1.99
SMARCAL1Q9NZC9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.128-201ENST00000363391 112 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 SNORA63-201ENST00000363450 132 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 SNORA5B-201ENST00000363786 132 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.326-201ENST00000365176 113 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 MIR559-201ENST00000385188 96 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 U3.26-201ENST00000391236 204 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 RNA5SP354-201ENST00000391247 136 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AC243964.1-201ENST00000441814 261 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AL118496.2-201ENST00000448300 230 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AC006026.2-201ENST00000457376 180 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 Y_RNA.631-201ENST00000459607 101 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AC022493.2-201ENST00000506122 481 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 CBX3P8-201ENST00000532412 525 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 SNRPGP17-201ENST00000603780 214 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 MIR8076-201ENST00000611401 83 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 AC135776.4-201ENST00000624300 1904 ntBASIC2.59□□□□□ -1.99
SMARCAL1Q9NZC9 MTND5P30-201ENST00000452896 1731 ntBASIC2.59□□□□□ -2
SMARCAL1Q9NZC9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 RNU6-596P-201ENST00000365395 98 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.395-201ENST00000383945 109 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.533-201ENST00000384596 114 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL133475.1-201ENST00000404414 305 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL365496.1-201ENST00000426885 215 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL353997.1-201ENST00000432936 108 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 MED28P2-201ENST00000475771 317 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 RNU6-470P-201ENST00000515954 104 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC022634.1-201ENST00000520765 532 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC022432.1-201ENST00000595739 310 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL158827.2-201ENST00000602494 330 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 CYP2C61P-201ENST00000604072 290 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AL691447.3-201ENST00000635020 330 ntBASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.58□□□□□ -2
SMARCAL1Q9NZC9 AC004944.1-201ENST00000517807 3059 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.5-201ENST00000362334 102 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 RNU6-1115P-201ENST00000362490 106 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 RNU6-227P-201ENST00000362865 103 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.123-201ENST00000363338 102 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 RNU1-105P-201ENST00000363470 161 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.463-201ENST00000384271 102 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 PMCHL1-202ENST00000423102 261 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AL137792.2-201ENST00000443484 235 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AL031659.1-201ENST00000447075 539 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 SNORA59A-201ENST00000459326 152 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 RPS27P26-201ENST00000494583 239 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AC022447.4-201ENST00000504053 364 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms