Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 Z99497.2-201ENST00000603634 310 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC016727.1-205ENST00000605437 569 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AL590240.4-201ENST00000616908 390 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC022079.1-201ENST00000621546 602 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC130454.1-201ENST00000622948 401 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 AC078883.4-201ENST00000623218 367 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 SEPT14P19-203ENST00000633205 211 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.54□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 RNU4-91P-201ENST00000364778 135 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 RNU6-142P-201ENST00000384019 107 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 SNORA12-201ENST00000391162 147 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 RPL23AP36-201ENST00000413895 458 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 CETN4P-201ENST00000432407 469 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC244505.5-201ENST00000443639 207 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 USP9YP29-201ENST00000445112 563 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC145146.1-201ENST00000496370 254 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 RNA5SP490-201ENST00000517141 136 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AC008088.1-201ENST00000580993 280 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 BNIP3P16-201ENST00000589779 534 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 Z84480.1-201ENST00000605131 311 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 AP000560.1-201ENST00000624150 1937 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 SNORD98-201ENST00000636377 67 ntBASIC1.53□□□□□ -2.16
KLHL28Q9NXS3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.17
KLHL28Q9NXS3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC233981.2-201ENST00000611524 1614 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 RNU6-43P-201ENST00000384302 107 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 RNU6-348P-201ENST00000384386 107 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 RNU4-46P-201ENST00000410818 138 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AL360221.1-201ENST00000445989 335 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 HMGN2P18-201ENST00000450680 270 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC013470.1-201ENST00000453438 462 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 MIR449C-201ENST00000516047 92 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC022880.1-201ENST00000534017 973 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC010928.2-201ENST00000588017 287 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC040904.1-201ENST00000590850 223 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 VN1R80P-201ENST00000597126 338 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AL590229.1-201ENST00000603497 542 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 AC008945.2-201ENST00000606056 604 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 LINC02555-201ENST00000563933 1951 ntBASIC1.52□□□□□ -2.17
KLHL28Q9NXS3 MTND4P23-201ENST00000447723 1363 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-661P-201ENST00000362409 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-181P-201ENST00000363225 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-336P-201ENST00000364891 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-338P-201ENST00000383888 105 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-26P-201ENST00000383985 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-692P-201ENST00000384496 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 FGF7P8-201ENST00000402994 292 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 MTATP6P17-201ENST00000431030 672 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AL358934.1-201ENST00000432346 324 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 MTCO3P7-201ENST00000510008 774 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNU6-445P-201ENST00000516949 107 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 RNA5SP503-201ENST00000517047 117 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC005786.1-201ENST00000588553 154 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC006566.1-201ENST00000608943 513 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AL158063.1-201ENST00000615349 536 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 uc_338.11-201ENST00000619132 160 ntBASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.51□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.5□□□□□ -2.17
KLHL28Q9NXS3 SNORA75-201ENST00000384158 137 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 261.7 ms