Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 SNORA31.16-201ENST00000516773 139 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 AK6P1-201ENST00000540219 478 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 SCOCP1-201ENST00000554676 349 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 CYP4A27P-201ENST00000567218 190 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 RPL17P51-201ENST00000605218 238 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 AC022202.1-201ENST00000613515 211 ntBASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BLOC1S4Q9NUP1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 U3.9-201ENST00000363823 204 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 SNORD14D-201ENST00000384390 87 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 MIR518A2-201ENST00000384966 87 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 AC025465.4-201ENST00000513422 638 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 SNRPGP18-201ENST00000553000 214 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 BNIP3P25-201ENST00000596023 559 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 AF250324.2-201ENST00000608299 610 ntBASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
BLOC1S4Q9NUP1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 SNORD113-7-201ENST00000363762 77 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-26P-201ENST00000383985 107 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-933P-201ENST00000384424 107 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 RNA5SP465-201ENST00000391195 109 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 MIR450B-201ENST00000401182 78 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 RNA5SP201-201ENST00000410316 124 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 SRIP2-201ENST00000428470 166 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 MTCO1P29-201ENST00000496868 288 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AC107222.1-201ENST00000510899 637 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 MTND1P5-201ENST00000517906 940 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AC104576.1-201ENST00000524225 88 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 SNORD53-201ENST00000579969 78 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 Z98751.3-201ENST00000604447 521 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 AC064836.2-201ENST00000609491 462 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
BLOC1S4Q9NUP1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-451P-201ENST00000362921 107 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 RNY4P14-201ENST00000363656 96 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 MTCO1P21-201ENST00000416634 589 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AC008549.1-201ENST00000512900 643 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AC016957.1-201ENST00000534895 309 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AC026464.5-201ENST00000562497 722 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AC078795.3-201ENST00000602913 472 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 MIR6840-201ENST00000611937 71 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AL359314.1-201ENST00000616913 261 ntBASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BLOC1S4Q9NUP1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
BLOC1S4Q9NUP1 RNU6-743P-201ENST00000364151 106 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA48.3-201ENST00000391081 134 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA3.2-201ENST00000408221 125 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AC083904.1-201ENST00000487828 231 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 ANXA2P1-201ENST00000505539 926 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AC005741.1-201ENST00000511094 432 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 HSPE1P18-201ENST00000517602 280 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AC026371.1-201ENST00000551867 419 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AC068944.2-201ENST00000610373 403 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AC005520.5-201ENST00000613926 164 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
BLOC1S4Q9NUP1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-234P-201ENST00000365229 104 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 Z98742.3-201ENST00000418637 326 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 AC012306.1-201ENST00000423267 114 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 HMGN2P26-201ENST00000463169 339 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 AC093259.1-201ENST00000509755 300 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms