Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AL139415.2-201ENST00000431968 163 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 SNAP23P1-201ENST00000433229 246 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 USP9YP8-201ENST00000441913 500 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC096638.1-201ENST00000444678 216 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AL031274.1-201ENST00000450334 232 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC068781.1-201ENST00000488231 618 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC022447.4-201ENST00000504053 364 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1069P-201ENST00000516612 133 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 CYCSP26-201ENST00000534107 320 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 MIR5692C1-201ENST00000585309 91 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AL670379.2-201ENST00000604983 252 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 SNORD14A-201ENST00000606526 91 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 AC090617.10-201ENST00000624308 134 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 RNU6-877P-201ENST00000383868 107 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 SNORA67.3-201ENST00000384366 140 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 SNORA51.11-201ENST00000384442 131 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 MIR1277-201ENST00000408536 78 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 WARS2P1-201ENST00000429678 537 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 MTCO2P3-201ENST00000442543 421 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 RNU1-41P-201ENST00000516161 162 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 RNU1-48P-201ENST00000516400 162 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 AC018630.3-201ENST00000542637 96 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 AC009127.3-201ENST00000570531 403 ntBASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.68□□□□□ -1.98
SMC4Q9NTJ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1252P-201ENST00000363054 104 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 RNU6-827P-201ENST00000365553 106 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1106P-201ENST00000390845 107 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AL591034.2-201ENST00000402839 359 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AL139156.1-201ENST00000412785 841 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 IPO7P1-201ENST00000442031 636 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC010095.1-201ENST00000443543 144 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 IFNA11P-201ENST00000446352 526 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 UBL5P3-201ENST00000475112 231 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC018868.1-201ENST00000491307 315 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AK3P2-201ENST00000507976 429 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC087854.1-201ENST00000519706 414 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AP005597.4-201ENST00000526762 229 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC118273.2-201ENST00000532092 465 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC103996.1-201ENST00000555468 102 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 MIR4648-201ENST00000580107 72 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC002553.4-201ENST00000616896 331 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 AC241585.2-209ENST00000638217 143 ntBASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMC4Q9NTJ3 RNU1-23P-201ENST00000363361 144 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 SNORA25B-201ENST00000365507 128 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 RNU6-692P-201ENST00000384496 107 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 SNRPEP10-201ENST00000420249 274 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 RPL39P5-202ENST00000512505 151 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 RNU6-323P-201ENST00000521915 107 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 AC018889.1-201ENST00000605372 397 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 AL357078.3-201ENST00000607528 618 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 FAM157A-202ENST00000615155 405 ntBASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMC4Q9NTJ3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.65□□□□□ -1.98
SMC4Q9NTJ3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 SNORA3A-201ENST00000364113 130 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 Y_RNA.248-201ENST00000364501 109 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RNA5SP160-201ENST00000364866 120 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RNU6-43P-201ENST00000384302 107 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RN7SKP61-201ENST00000410642 295 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RPL30P16-201ENST00000419341 429 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RPL23AP95-201ENST00000426806 265 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RPS15AP10-201ENST00000432472 382 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RPL23AP7-203ENST00000449021 469 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 FGF7P6-202ENST00000451282 293 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AL353752.1-201ENST00000454946 260 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RNU7-66P-201ENST00000459469 62 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AC025423.5-201ENST00000550230 219 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 MIR3136-201ENST00000583498 78 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AC064836.2-201ENST00000609491 462 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 AC100810.6-201ENST00000638068 285 ntBASIC2.65□□□□□ -1.99
SMC4Q9NTJ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AL596028.1-201ENST00000326971 197 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 RNU6-254P-201ENST00000363377 107 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms