Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTND2P7-201ENST00000521337 640 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.72□□□□□ -2.29
CISHQ9NSE2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.72□□□□□ -2.29
CISHQ9NSE2 AL391646.1-201ENST00000603860 190 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 AP002782.1-201ENST00000623107 614 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
CISHQ9NSE2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 SNORA32.2-201ENST00000384049 122 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 MTCYBP2-201ENST00000407745 171 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 RNU6-1245P-201ENST00000411130 106 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 ARL5AP1-201ENST00000418991 388 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MTCO3P29-201ENST00000432119 779 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MTND3P1-201ENST00000441336 220 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 snoU13.27-201ENST00000459278 104 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 HMGN2P9-201ENST00000476875 229 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 RNU1-86P-201ENST00000516108 154 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 RNU1-107P-201ENST00000516617 154 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
CISHQ9NSE2 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MTND3P19-201ENST00000603825 345 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 AL022345.2-201ENST00000606307 135 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 SNORD98-201ENST00000636377 67 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 AC027514.1-201ENST00000588561 1603 ntBASIC0.71□□□□□ -2.3
CISHQ9NSE2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CISHQ9NSE2 RNU5E-10P-201ENST00000363506 118 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 RNU6-17P-201ENST00000384245 107 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 RNU6-18P-201ENST00000384527 107 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 snoU13.30-201ENST00000458951 104 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AP000797.1-201ENST00000478870 387 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 RNU6-123P-201ENST00000516163 102 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 RN7SKP88-201ENST00000516847 250 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 CYCSP23-201ENST00000519781 313 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC022616.6-201ENST00000520479 119 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 MIR3664-201ENST00000579074 99 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 MIR5692A1-201ENST00000580523 69 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 BNIP3P8-201ENST00000597863 560 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC008945.2-201ENST00000606056 604 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC080013.3-201ENST00000606839 578 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.7□□□□□ -2.3
CISHQ9NSE2 AL021879.1-201ENST00000611756 288 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 7SK.8-201ENST00000612110 250 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 7SK.11-201ENST00000615477 250 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 7SK.13-201ENST00000622040 250 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AC106858.1-201ENST00000637497 429 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 U4.7-201ENST00000638126 106 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 AL159152.1-201ENST00000635019 2587 ntBASIC0.7□□□□□ -2.3
CISHQ9NSE2 RNU6-527P-201ENST00000363425 104 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 RNU6-371P-201ENST00000364283 108 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 Y_RNA.226-201ENST00000364337 114 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 EEF1A1P40-201ENST00000412883 573 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.69□□□□□ -2.3
CISHQ9NSE2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.69□□□□□ -2.3
CISHQ9NSE2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.69□□□□□ -2.3
CISHQ9NSE2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.69□□□□□ -2.3
CISHQ9NSE2 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 AL137100.2-201ENST00000555786 315 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 AC008752.3-201ENST00000588113 712 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.69□□□□□ -2.3
CISHQ9NSE2 MIR3976-201ENST00000606807 139 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 AL365434.2-201ENST00000607979 234 ntBASIC0.69□□□□□ -2.3
CISHQ9NSE2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.69□□□□□ -2.3
CISHQ9NSE2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CISHQ9NSE2 RNU6-862P-201ENST00000362804 105 ntBASIC0.68□□□□□ -2.3
CISHQ9NSE2 SNORD56.2-201ENST00000363242 71 ntBASIC0.68□□□□□ -2.3
CISHQ9NSE2 RNU4-92P-201ENST00000363783 136 ntBASIC0.68□□□□□ -2.3
CISHQ9NSE2 RNU1-96P-201ENST00000364163 162 ntBASIC0.68□□□□□ -2.3
CISHQ9NSE2 SNORD31B-201ENST00000364977 69 ntBASIC0.68□□□□□ -2.3
CISHQ9NSE2 RNU6-331P-201ENST00000384724 107 ntBASIC0.68□□□□□ -2.3
CISHQ9NSE2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CISHQ9NSE2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms