Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 U3.8-201ENST00000363675 217 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC068533.2-201ENST00000411872 306 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 BTF3L4P1-201ENST00000413813 468 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 MTND4P20-201ENST00000424125 869 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 MTCYBP1-201ENST00000454315 1119 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC105313.1-201ENST00000509121 353 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 RNU6-1225P-201ENST00000516336 65 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AP001893.2-201ENST00000526949 202 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC007363.1-201ENST00000604736 620 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC231657.1-201ENST00000624313 397 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 SCARNA4-202ENST00000625402 129 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 MTND5P42-201ENST00000637720 498 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 RNU6-701P-201ENST00000384059 107 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 LRRC34P2-201ENST00000514850 553 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC021451.1-201ENST00000523498 1129 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC018889.1-201ENST00000605372 397 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC069545.1-201ENST00000605671 358 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 AC090186.1-201ENST00000605991 572 ntBASIC0.32□□□□□ -2.36
MRPL40Q9NQ50 RNU4-12P-201ENST00000365233 139 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 SNORA4.3-201ENST00000365564 137 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 MTCO3P41-201ENST00000414801 328 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 BX664727.1-201ENST00000416024 466 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 AC245047.7-201ENST00000440265 293 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 RNU6-1102P-201ENST00000516149 96 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 RNU11-2P-201ENST00000516898 142 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 APOOP3-201ENST00000536787 586 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 AC087897.1-201ENST00000550134 156 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 AL353778.1-201ENST00000603149 408 ntBASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.31□□□□□ -2.36
MRPL40Q9NQ50 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AL079342.2-201ENST00000403367 482 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 Y_RNA.623-201ENST00000411128 95 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 NDUFB1P2-201ENST00000449477 176 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AC048334.1-201ENST00000477975 159 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 RNU6-914P-201ENST00000516749 109 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 BNIP3P6-201ENST00000549284 499 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 MIR2909-201ENST00000617113 69 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AC112204.3-201ENST00000623822 332 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AC073544.1-201ENST00000600110 1595 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 AL159152.1-201ENST00000635019 2587 ntBASIC0.3□□□□□ -2.36
MRPL40Q9NQ50 SNORA63.3-201ENST00000362682 132 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 RNU6-969P-201ENST00000383900 105 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 SNORA80D-201ENST00000384488 135 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AF228730.1-201ENST00000397972 663 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 USP9YP14-201ENST00000430663 563 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AL627311.1-201ENST00000431514 115 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 HMGN1P33-201ENST00000432945 451 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AC121161.1-201ENST00000510606 652 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 RNU5F-2P-201ENST00000516066 82 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AC098483.2-201ENST00000603158 454 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 AC126177.8-201ENST00000618339 1015 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 MTND4P14-201ENST00000435799 1354 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 MTND5P33-201ENST00000571250 1450 ntBASIC0.29□□□□□ -2.36
MRPL40Q9NQ50 MIR412-201ENST00000362142 91 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 SNORA75B-201ENST00000384053 137 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 RNA5SP111-201ENST00000411386 101 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 SNRPEP8-201ENST00000442866 260 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 AC073910.1-201ENST00000445047 438 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 AC113410.1-201ENST00000505029 247 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 DEFB131D-201ENST00000526803 184 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 Z83818.1-201ENST00000603584 150 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 OR4H6P-202ENST00000603819 340 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 AC021506.2-201ENST00000612354 169 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
MRPL40Q9NQ50 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms