Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL359854.1-201ENST00000614203 1594 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 Y_RNA.48-201ENST00000362710 103 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 Y_RNA.158-201ENST00000363651 101 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 CD24P4-201ENST00000382840 243 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 RNY1P14-201ENST00000384426 108 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 SNORA12.2-201ENST00000391040 156 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 AL031121.1-201ENST00000406553 254 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 Y_RNA.706-201ENST00000516933 99 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 AC068657.1-201ENST00000520807 306 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 AC006157.1-201ENST00000611750 366 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 AC093010.3-201ENST00000570269 15214 ntBASIC3.38□□□□□ -1.87
VTA1Q9NP79 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VTA1Q9NP79 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VTA1Q9NP79 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
VTA1Q9NP79 AC010329.5-201ENST00000623497 2174 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.37□□□□□ -1.87
VTA1Q9NP79 RNU6-1159P-201ENST00000362933 107 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 Y_RNA.314-201ENST00000365114 102 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 Y_RNA.364-201ENST00000365532 101 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 DYNLT3P1-201ENST00000378574 347 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 Y_RNA.504-201ENST00000384481 104 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 MIR606-201ENST00000384851 96 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 MRPL42P3-201ENST00000401492 326 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 AL358453.1-201ENST00000422522 250 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.37□□□□□ -1.87
VTA1Q9NP79 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.37□□□□□ -1.87
VTA1Q9NP79 RPL30P12-201ENST00000474666 353 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 RPL23AP75-201ENST00000491601 451 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 SEM1P1-201ENST00000506694 209 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 SCGB1D5P-201ENST00000515134 247 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 RNA5SP112-201ENST00000515937 99 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 RNU6-1045P-201ENST00000516321 107 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 Y_RNA.721-201ENST00000517207 102 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
VTA1Q9NP79 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.37□□□□□ -1.87
VTA1Q9NP79 AC016727.2-201ENST00000603988 621 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 AC092435.3-201ENST00000565538 3654 ntBASIC3.37□□□□□ -1.87
VTA1Q9NP79 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.37□□□□□ -1.87
VTA1Q9NP79 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.36□□□□□ -1.87
VTA1Q9NP79 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VTA1Q9NP79 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.36□□□□□ -1.87
VTA1Q9NP79 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
VTA1Q9NP79 RNU5B-2P-201ENST00000363036 113 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 Y_RNA.526-201ENST00000384572 110 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 SAR1AP2-201ENST00000392696 594 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 MIR190B-201ENST00000401119 79 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 RPL23AP22-201ENST00000437556 453 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AC105272.1-201ENST00000438604 198 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AP001324.2-201ENST00000461163 319 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 RPL30P1-201ENST00000488676 339 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AIG1P1-201ENST00000503376 148 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 SNORA40.14-201ENST00000516543 86 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VTA1Q9NP79 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.36□□□□□ -1.87
VTA1Q9NP79 MIR3162-201ENST00000581818 82 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AC092447.9-201ENST00000603395 144 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AL138963.2-201ENST00000605137 226 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AL359198.2-201ENST00000611836 194 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 SNORA43.4-201ENST00000629559 138 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 AL606534.2-204ENST00000635008 178 ntBASIC3.36□□□□□ -1.87
VTA1Q9NP79 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VTA1Q9NP79 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
VTA1Q9NP79 OR56A5-201ENST00000340110 738 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 Y_RNA.145-201ENST00000363527 102 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 Y_RNA.148-201ENST00000363557 117 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 SNORA29-201ENST00000384183 140 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 Y_RNA.496-201ENST00000384444 101 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 MIR153-2-201ENST00000385225 87 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VTA1Q9NP79 SNORA69.1-201ENST00000390904 137 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 RNA5SP494-201ENST00000410653 129 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 RPS26P42-201ENST00000413485 326 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 MTCO3P19-201ENST00000415864 321 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 AC097463.2-201ENST00000421074 142 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.35□□□□□ -1.87
VTA1Q9NP79 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
VTA1Q9NP79 RPL31P41-201ENST00000477967 372 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 AC093852.1-201ENST00000503587 266 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 AC073410.2-201ENST00000603240 332 ntBASIC3.35□□□□□ -1.87
VTA1Q9NP79 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.35□□□□□ -1.87
VTA1Q9NP79 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.35□□□□□ -1.87
VTA1Q9NP79 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTA1Q9NP79 AL355596.1-201ENST00000565399 3996 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms