Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC103851.1-201ENST00000506833 274 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC118273.2-201ENST00000532092 465 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 MIR3923-201ENST00000579521 83 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 MIR3651-201ENST00000630427 90 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AL355596.1-201ENST00000565399 3996 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 Y_RNA.88-201ENST00000363029 99 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RNU6-968P-201ENST00000384076 107 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RNU1-52P-201ENST00000384190 164 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RNU6-378P-201ENST00000384324 107 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 USP9YP30-201ENST00000430729 455 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 snoU13.6-201ENST00000458785 104 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 AC116337.1-201ENST00000509680 687 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RN7SKP24-201ENST00000515888 284 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RNU6-965P-201ENST00000516721 96 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 CYCSP26-201ENST00000534107 320 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 CYP4A27P-201ENST00000567218 190 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 PCGEM1.1-201ENST00000613431 131 ntBASIC2.26□□□□□ -2.05
CHMP1AQ9HD42 RNU4-56P-201ENST00000364700 142 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 RNU6-546P-201ENST00000383991 107 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 RN7SKP158-201ENST00000410453 326 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC074085.1-201ENST00000413598 418 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AL590556.1-201ENST00000423231 483 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 RPS3AP52-201ENST00000435639 297 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AF186996.7-201ENST00000492781 209 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 Y_RNA.691-201ENST00000516611 103 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 RNU1-54P-201ENST00000517181 120 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC233702.2-202ENST00000562547 291 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AP001094.1-201ENST00000579805 193 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 YPEL5P2-201ENST00000605553 359 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC009318.2-201ENST00000610917 651 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AL355073.2-201ENST00000612106 557 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AC005520.5-201ENST00000613926 164 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 AL132822.1-201ENST00000617063 513 ntBASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP1AQ9HD42 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 SNORA72.1-201ENST00000363485 129 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 RNU6-842P-201ENST00000384269 107 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 UBA52P6-201ENST00000399822 382 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AL138827.1-201ENST00000402666 306 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 CBX3P6-201ENST00000430257 527 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC087499.2-201ENST00000432861 149 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AL513124.1-201ENST00000450410 614 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 MTND3P10-201ENST00000450967 341 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 SNORD5.1-201ENST00000458800 75 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 RPS29P26-201ENST00000477483 171 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 FO393415.2-201ENST00000480085 343 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 SNORA4.4-201ENST00000515921 135 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 ACA59.1-201ENST00000515966 143 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 RNU6-567P-201ENST00000516746 107 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 RNU6-667P-201ENST00000517186 102 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC034114.1-201ENST00000520293 285 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC022616.8-201ENST00000533569 253 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC005668.1-201ENST00000571142 476 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC005730.3-201ENST00000583067 366 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 uc_338.5-201ENST00000611839 155 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AC022202.1-201ENST00000613515 211 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 MIR1248-201ENST00000629190 106 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 TPTEP1-208ENST00000636884 213 ntBASIC2.24□□□□□ -2.05
CHMP1AQ9HD42 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 RNU6-596P-201ENST00000365395 98 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 Y_RNA.473-201ENST00000384333 102 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 SNORA48.7-201ENST00000391302 135 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 MIR208B-201ENST00000401172 77 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms