Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AC026784.1-201ENST00000507986 352 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AC023141.12-201ENST00000512399 199 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 RNU6-346P-201ENST00000516288 111 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AC008011.1-201ENST00000545989 227 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AC021231.3-201ENST00000558497 370 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 MIR5571-201ENST00000577998 113 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 MIR5187-201ENST00000583479 76 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AL121772.2-201ENST00000614331 297 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 AC021753.1-201ENST00000635724 168 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 SNORD98-201ENST00000636377 67 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 MTND5P35-201ENST00000557537 1720 ntBASIC3.18□□□□□ -1.9
MSL2Q9HCI7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MSL2Q9HCI7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AL672296.1-201ENST00000427780 2158 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 Y_RNA.275-201ENST00000364726 110 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RNU6-1145P-201ENST00000384246 107 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 Y_RNA.498-201ENST00000384460 102 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AL512633.1-201ENST00000399931 655 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RPL23AP82-202ENST00000427528 469 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 IFNA11P-201ENST00000446352 526 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AC007395.1-201ENST00000451333 677 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RNU7-120P-201ENST00000459334 63 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RPL30P14-201ENST00000482744 348 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RNU6-155P-201ENST00000516347 100 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RNU6-789P-201ENST00000517105 102 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AC093331.1-201ENST00000521474 169 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AP000867.2-201ENST00000532468 320 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AC090897.2-201ENST00000581715 130 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 HSPE1P7-201ENST00000604681 321 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 MIR92B-201ENST00000607575 96 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AC048347.1-201ENST00000624621 427 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AC110491.1-201ENST00000562191 2010 ntBASIC3.17□□□□□ -1.9
MSL2Q9HCI7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
MSL2Q9HCI7 AC004944.1-201ENST00000517807 3059 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 MIR410-201ENST00000362222 80 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 RNA5SP124-201ENST00000362739 110 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 Y_RNA.179-201ENST00000363844 90 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 Y_RNA.506-201ENST00000384494 102 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 RNU2-37P-201ENST00000410695 177 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 RPS15AP5-201ENST00000436276 388 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 RPL21P104-201ENST00000464143 478 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 RPS29P26-201ENST00000477483 171 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 Y_RNA.683-201ENST00000516508 93 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 NACAP3-201ENST00000552100 481 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AL137843.1-201ENST00000605078 385 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 CR392039.5-201ENST00000623201 510 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AC091932.3-201ENST00000624223 323 ntBASIC3.16□□□□□ -1.9
MSL2Q9HCI7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
MSL2Q9HCI7 AL133383.2-201ENST00000622958 2336 ntBASIC3.15□□□□□ -1.9
MSL2Q9HCI7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
MSL2Q9HCI7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
MSL2Q9HCI7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MSL2Q9HCI7 AC092593.1-201ENST00000515413 1815 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 AC092268.1-201ENST00000342691 405 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 RNU6-324P-201ENST00000363957 106 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 SNORA62.3-201ENST00000365110 153 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 RNY4P28-201ENST00000365281 93 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 AL359837.1-201ENST00000381357 287 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 RNU6-125P-201ENST00000384505 107 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.597-201ENST00000410463 100 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 AL035423.1-201ENST00000420331 213 ntBASIC3.15□□□□□ -1.91
MSL2Q9HCI7 AL358075.3-201ENST00000426289 226 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms