Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 DUXAP9-208ENST00000622815 614 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC099654.14-201ENST00000638599 341 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC131280.1-202ENST00000624067 4211 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-1317P-201ENST00000364582 104 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU4-56P-201ENST00000364700 142 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 Y_RNA.279-201ENST00000364763 95 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 Y_RNA.301-201ENST00000364990 103 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-1283P-201ENST00000365314 105 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-142P-201ENST00000384019 107 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-767P-201ENST00000384132 107 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-876P-201ENST00000391295 104 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 MTND3P8-201ENST00000412909 339 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 MTND1P23-201ENST00000416931 372 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 AL139396.1-201ENST00000421137 167 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 SNORA48.11-201ENST00000517015 89 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 AP005902.1-201ENST00000521358 186 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 AC093249.1-201ENST00000567049 203 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 MIR4801-201ENST00000582704 82 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 MIR8076-201ENST00000611401 83 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
POLR1BQ9H9Y6 SNORD62.1-201ENST00000362541 86 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RNA5SP125-201ENST00000364843 120 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RN7SKP32-201ENST00000410167 303 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 AC009963.1-201ENST00000417265 157 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RPL21P111-201ENST00000418453 477 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 AC112220.1-201ENST00000434628 355 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 DAP3P1-201ENST00000441522 278 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 PCMTD1P1-201ENST00000455560 355 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RPS29P27-201ENST00000463711 170 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 AC130509.1-201ENST00000464158 433 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 HMGB1P35-201ENST00000503360 598 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-567P-201ENST00000516746 107 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-566P-201ENST00000516790 107 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RNA5SP454-201ENST00000517231 127 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-586P-201ENST00000517265 104 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 AC021231.3-201ENST00000558497 370 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 MIR4742-201ENST00000581069 85 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 MIR4769-201ENST00000584126 77 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 AC078795.3-201ENST00000602913 472 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 HMGB1P24-202ENST00000615653 685 ntBASIC2.51□□□□□ -2.01
POLR1BQ9H9Y6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 CBX3P1-201ENST00000325243 554 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 Y_RNA.160-201ENST00000363677 92 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 Y_RNA.166-201ENST00000363730 102 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 U3.13-201ENST00000364804 214 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 MTND1P17-201ENST00000448961 204 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 MTND1P11-201ENST00000456661 876 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AC090515.1-201ENST00000465295 476 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AC118273.2-201ENST00000532092 465 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AC007375.1-201ENST00000554513 578 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL158827.2-201ENST00000602494 330 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL691447.3-201ENST00000635020 330 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 AC009541.1-201ENST00000438279 2662 ntBASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
POLR1BQ9H9Y6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 SNORA38-201ENST00000363946 132 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 RNA5SP425-201ENST00000410336 112 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 RNU4-53P-201ENST00000410828 140 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 Z98742.3-201ENST00000418637 326 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AL590556.1-201ENST00000423231 483 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 CR769767.1-201ENST00000436337 346 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 USP9YP8-201ENST00000441913 500 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 RNU7-187P-201ENST00000458985 68 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AC104564.1-201ENST00000493028 407 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms